Number of particles = 19 # (required) this must be the first line A = 1.0 Angstrom (basic length-scale) # (optional) basic length-scale: default A = 1.0 [Angstrom] H0(1,1) = 5.624808 A H0(1,2) = 0 A H0(1,3) = 0 A # (required) this is the supercell's 1st edge, in A H0(2,1) = 0 A H0(2,2) = 4.871227 A H0(2,3) = 0 A # (required) this is the supercell's 2nd edge, in A H0(3,1) = 0 A H0(3,2) = 0 A H0(3,3) = 25 A # (required) this is the supercell's 3rd edge, in A Transform(1,1) = 1 Transform(1,2) = 0 Transform(1,3) = 0 Transform(2,1) = 0 Transform(2,2) = 1 Transform(2,3) = 0 Transform(3,1) = 0 Transform(3,2) = 0 Transform(3,3) = 1 # (optional) apply additional transformation on H0: H = H0 * Transform; # default = Identity matrix. eta(1,1) = 0 eta(1,2) = 0 eta(1,3) = 0 eta(2,2) = 0 eta(2,3) = 0 eta(3,3) = 0 # (optional) apply additional Lagrangian strain on H0: # H = H0 * sqrt(Identity_matrix + 2 * eta); # default = zero matrix. # ENSUING ARE THE ATOMS, EACH ATOM DESCRIBED BY A ROW # 1st entry is atomic mass in a.m.u. # 2nd entry is the chemical symbol (max 2 chars) # 3rd entry is reduced coordinate s1 (dimensionless) # 4th entry is reduced coordinate s2 (dimensionless) # 5th entry is reduced coordinate s3 (dimensionless) # real coordinates x = s * H, x, s are 1x3 row vectors # 6th entry is d(s1)/dt in basic rate-scale R # 7th entry is d(s2)/dt in basic rate-scale R # 8th entry is d(s3)/dt in basic rate-scale R R = 1.0 [ns^-1] # (optional) basic rate-scale: default R = 1.0 [ns^-1] 195.08 Pt 0 0 0 0 0 0 195.08 Pt .499999 0 0 0 0 0 195.08 Pt .25 .499999 0 0 0 0 195.08 Pt .750001 .499999 0 0 0 0 195.08 Pt .25 .166666 .091853 0 0 0 195.08 Pt .750001 .166666 .091853 0 0 0 195.08 Pt 0 .666666 .091853 0 0 0 195.08 Pt .499999 .666666 .091853 0 0 0 195.08 Pt .499918 .3338 .18223 0 0 0 195.08 Pt 8.9e-05 .333151 .183041 0 0 0 195.08 Pt .249449 .83409 .182319 0 0 0 195.08 Pt .750721 .834392 .182187 0 0 0 195.08 Pt .995851 .99696 .274588 0 0 0 195.08 Pt .498115 .001386 .274543 0 0 0 195.08 Pt .252309 .500794 .274549 0 0 0 195.08 Pt .746535 .500187 .274428 0 0 0 16 O .011021 .012649 .370861 0 0 0 1 H .184142 .987895 .370225 0 0 0 1 H .987623 .212578 .370448 0 0 0 # Analysis of this configuration: # # supercell volume = 684.9929149854 = 684.9929149854 A^3 # avg. atomic volume = 36.0522586834421 = 36.0522586834421 A^3 # atomic number density = 0.0277375131688843 = 0.0277375131688843 A^-3 # avg. mass density = 7.61014589208396 g/cm^3 # # 19 mobile atoms, # average velocity = ( 0 0 0 ), # total kinetic energy = 0 = 0 [eV] # avg. atomic kinetic energy = 0 = 0 [eV] # = 0 [kJ/mol] # MD temperature = 0 = 0 [K]. # # -------------- Species Summary -------------- # Type Mass[amu] Count Abundance Wt. Pct. # Pt 195.080 16 84.21% 99.43% # O 16.000 1 5.26% 0.51% # H 1.000 2 10.53% 0.06% # ---------------------------------------------